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What about EMMA?  (cctbx)  It writes out operators, at any rate, but you may
want to feed it only CA atoms, to make it quicker (not that it's slow). 

phx.

 

> -----Original Message-----
> From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On 
> Behalf Of Phil Evans
> Sent: 15 May 2006 10:01
> To: [email protected]
> Subject: [ccp4bb]: Symmetry superposition
> 
> ***  For details on how to be removed from this list visit the  ***
> ***          CCP4 home page http://www.ccp4.ac.uk         ***
> 
> 
> 
> Is there a program somewhere which will give me the best 
> symmetry operation to superimpose two molecules? I'm trying 
> to compare different autobuilds where the different programs 
> have built different asymmetric units (sometimes for 
> different fragments). The residues numbering is random of course.
> 
> I've tried 
> 
> Coot, but the writing out of symmetry-related coordinates is 
> currently broken, 
> 
> ccp4mg  but I don't seem to be able to get symmetry-related 
> neighbours of molecule 1 (say) around the position of 
> molecule 2, only around its own position
> 
> any suggestions?
> 
> Phil
> 
> 

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