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This particular line was not in 6.0, but is in 6.0.1 to be released shortly. Version 6.0 had a number of dictionary updates from Garib, and 6.0.1 has a number more, but I don't know the precise history of every change ;-) Martyn On Tue, 6 Jun 2006, Tim Gruene wrote: > *** For details on how to be removed from this list visit the *** > *** CCP4 home page http://www.ccp4.ac.uk *** > > > Yes, it should. It should have been at least one year ago. Garib has been > providing corrected cif-files from his home page long before the advent of > ccp4-6.0 - I wonder why they didn't make it in the current release ;-) > > Tim > > -- > Tim Gruene > Institut fuer anorganische Chemie > Tammannstr. 4 > D-37077 Goettingen > > GPG Key ID = A46BEE1A > > > On Mon, 5 Jun 2006, Morri Feldman wrote: > > > *** For details on how to be removed from this list visit the *** > > *** CCP4 home page http://www.ccp4.ac.uk *** > > > > > > Hello, > > > > I'm refining a structure containing DNA and noticed that the C5 methyl > > group of Thymidine isn't being held planar with the rest of the ring. > > Looking at the restraints file Td.cif, I see that C5M isn't included > > in the list of planarity constraints. I added the following as the > > last line in the file: > > Td plan C5M 0.020 > > > > After refining the structure with C5M listed as part of the planar > > ring, all the C5-Methyls in my structure now appear planar with the > > rest of the ring. > > > > Should Td.cif be changed to include C5M in the list of planar atoms? > > > > Thanks, > > Morri > > > > -- > > Morri Feldman > > (415) 514-0575 > > Shokat Lab > > UCSF Biophysics Program > > > ************************************************************************** * * * Dr. Martyn Winn * * * * Daresbury Laboratory, Daresbury, Warrington, WA4 4AD, ENGLAND * * Tel: +44 1925 603455 E-mail: [EMAIL PROTECTED] (personal) * * Fax: +44 1925 603825 E-mail: [EMAIL PROTECTED] (CCP4 problems) * * URL: http://www.ccp4.ac.uk/martyn/martyn.html * **************************************************************************
