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Dear all,
I have a weird problem running Molrep on a Mac OS X (PowerPC). I
installed molrep together with all the ccp4 suite from the fink packages
maintained thanks to W. Scott.
Any molrep job I start (either from the ccp4i GUI or from the command
line) ends in an error such as this:
######################################################################
(...)
Sol_RF 29 142.19 -89.52 179.95 90.52 75.62 89.55 19.27
1.10
Sol_RF 30 90.00 80.08 180.00 0.00 180.00 19.83 19.16
1.09
Final number of peaks : 30
* Plotfile: molrep_rf.ps
Open failed: Unit: 9, File:
/tmp/mol/molrep_temp1.03523selfrot_srf.dat (logical:
/tmp/mol/molrep_temp1.03523selfrot_srf.dat)
<B><FONT COLOR="#FF0000"><!--SUMMARY_BEGIN-->
Last system error message: Bad file descriptor
MOLREP(ccp4)9.2.10: Open failed: File:
/tmp/mol/molrep_temp1.03523selfrot_srf.dat
MOLREP(ccp4)9.2.10: Open failed: File:
/tmp/mol/molrep_temp1.03523selfrot_srf.dat
Times: User: 223.2s System: 9.6s Elapsed: 6:21
</pre>
</html>
<!--SUMMARY_END--></FONT></B>
######################################################################
So, the program runs up to a certain point and then stops. Some of the
intermediate and output files are created (in the /tmp directory) and
some information written in them (for example the postscript file shows
only two Chi sections)
I'm wondering if Molrep may be trying to write two files with the same
name only distinguished (in a UNIX filesystem) by letter-case. This is
not supported in the Mac OS X plus (with register) filesystem.
But perhaps the problem is somewhere else... I would appreciate any clues.
I verified the disk and its permissions and no errors (other than minor
concerning unrelated permissions) were reported.
Thanking you in advance for your help,
Miguel
- --
Miguel Ortiz Lombardía
Centro de Investigaciones Oncológicas
C/ Melchor Fernández Almagro, 3
28029 Madrid, Spain
Tel. +34 912 246 900
Fax. +34 912 246 976
e-mail: [EMAIL PROTECTED]
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Et ainsi ne pouvant faire que ce qui est juste fût fort, on a fait que
ce qui est fort fût juste.
Blaise Pascal, Pensées
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