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I have two structures, which have 60% sequence identity and
80%similarity.The C-alpha rms fit is 0.8300,not counting the flexible loop
area.I'm a little bit worried.Is that too big? Could anybody tell me what I
should expect for the rms fit from two highly similar structures?
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=3709526&query_hl=1&itool=pubmed_docsum
(reprint at:
http://www.pubmedcentral.gov/picrender.fcgi?artid=1166865&blobtype=pdf)
related:
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15299650&query_hl=3&itool=pubmed_docsum
(reprint at: http://xray.bmc.uu.se/cgi-bin/gerard/reprint_mailer.pl?pref=35)
--dvd
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Gerard J. Kleywegt
[Research Fellow of the Royal Swedish Academy of Sciences]
Dept. of Cell & Molecular Biology University of Uppsala
Biomedical Centre Box 596
SE-751 24 Uppsala SWEDEN
http://xray.bmc.uu.se/gerard/ mailto:[EMAIL PROTECTED]
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