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*** CCP4 home page http://www.ccp4.ac.uk ***
Dear Charles:
I just downloaded it, moved /usr/local out of the way, moved /sw out of
the way, installed cleanly, and I get this:
zsh-% sudo mv /usr/local /usr/local.bak
zsh-% sudo mkdir /usr/local
zsh-% cd /usr/local
zsh-% ls
bin/ lib/
zsh-% cd bin
zsh-% ls
bltsh* bltwish* tclsh@ tclsh8.4* wish@
wish8.4*
zsh-% ./bltwish
[1] 28854 segmentation fault ./bltwish
Here is the report in its full heiniousity:
Date/Time: 2006-08-29 09:29:15.364 -0700
OS Version: 10.4.7 (Build 8J2135)
Report Version: 4
Command: bltwish
Path: ./bltwish
Parent: zsh [27687]
Version: ??? (???)
PID: 28878
Thread: 0
Exception: EXC_BAD_ACCESS (0x0001)
Codes: KERN_INVALID_ADDRESS (0x0001) at 0x74657320
Thread 0 Crashed:
0 libX11.6.dylib 0x9b8df800 _XInternAtom + 80
1 libX11.6.dylib 0x9b8dfb62 XInternAtom + 81
2 bltwish 0x00036f8d Blt_DragDropInit + 234
3 bltwish 0x000029a9 Blt_Init + 815
4 bltwish 0x00002343 Tcl_AppInit + 115
5 libtk8.4.dylib 0x9b0f72eb Tk_MainEx + 761
6 bltwish 0x000022c5 main + 51
7 bltwish 0x0000223a _start + 228 (crt.c:272)
8 bltwish 0x00002155 start + 41
Thread 1:
0 libSystem.B.dylib 0x9001aafc select + 12
1 libSystem.B.dylib 0x90024b07 _pthread_body + 84
Thread 2:
0 libSystem.B.dylib 0x9000a5c7 mach_msg_trap + 7
1 com.unsanity.ape 0xc0001d12 __ape_agent + 307
2 libSystem.B.dylib 0x90024b07 _pthread_body + 84
Thread 0 crashed with i386 Thread State:
eax: 0x9b8df753 ebx: 0x9b8df7be ecx:0x001c1008 edx: 0x74657320
edi: 0x001c1008 esi: 0x00130408 ebp:0xbfffd868 esp: 0xbfffd810
ss: 0x0000002f efl: 0x00010286 eip:0x9b8df800 cs: 0x00000027
ds: 0x0000002f es: 0x0000002f fs:0x00000000 gs: 0x00000037
Binary Images Description:
0x1000 - 0xe7fff bltwish /usr/local/bin/bltwish
0x8fe00000 - 0x8fe4cfff dyld 45.3 /usr/lib/dyld
0x90000000 - 0x9016efff libSystem.B.dylib /usr/lib/libSystem.B.dylib
0x901be000 - 0x901c0fff libmathCommon.A.dylib
/usr/lib/system/libmathCommon.A.dylib
0x901c2000 - 0x901fefff com.apple.CoreText 1.1.1
(???)
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/CoreText.framework/Versions/A/CoreText
0x90225000 - 0x902fafff ATS
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ATS.framework/Versions/A/ATS
0x9031a000 - 0x9076afff com.apple.CoreGraphics 1.258.33
(???)
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/CoreGraphics.framework/Versions/A/CoreGraphics
0x90801000 - 0x908c9fff com.apple.CoreFoundation 6.4.6
(368.27)
/System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation
0x90907000 - 0x90907fff com.apple.CoreServices 10.4
(???)
/System/Library/Frameworks/CoreServices.framework/Versions/A/CoreServices
0x90909000 - 0x909fcfff libicucore.A.dylib /usr/lib/libicucore.A.dylib
0x90a4c000 - 0x90acbfff libobjc.A.dylib /usr/lib/libobjc.A.dylib
0x90af4000 - 0x90b57fff libstdc++.6.dylib /usr/lib/libstdc++.6.dylib
0x90bc6000 - 0x90bcdfff libgcc_s.1.dylib /usr/lib/libgcc_s.1.dylib
0x90bd2000 - 0x90c42fff com.apple.framework.IOKit 1.4.4
(???) /System/Library/Frameworks/IOKit.framework/Versions/A/IOKit
0x90c57000 - 0x90c69fff libauto.dylib /usr/lib/libauto.dylib
0x90c6f000 - 0x90f14fff com.apple.CoreServices.CarbonCore
682.12
/System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/CarbonCore.framework/Versions/A/CarbonCore
0x90f57000 - 0x90fbffff com.apple.CoreServices.OSServices
4.1
/System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/OSServices.framework/Versions/A/OSServices
0x90ff7000 - 0x91035fff com.apple.CFNetwork
129.16
/System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/CFNetwork.framework/Versions/A/CFNetwork
0x91047000 - 0x91057fff com.apple.WebServices 1.1.3
(1.1.0)
/System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/WebServicesCore.framework/Versions/A/WebServicesCore
0x91062000 - 0x910e0fff com.apple.SearchKit
1.0.5
/System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/SearchKit.framework/Versions/A/SearchKit
0x91115000 - 0x91133fff com.apple.Metadata 10.4.4
(121.36)
/System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/Metadata.framework/Versions/A/Metadata
0x9113f000 - 0x9114dfff libz.1.dylib /usr/lib/libz.1.dylib
0x91150000 - 0x91306fff com.apple.security 4.4.1
(27569) /System/Library/Frameworks/Security.framework/Versions/A/Security
0x913f5000 - 0x913fdfff com.apple.DiskArbitration
2.1
/System/Library/Frameworks/DiskArbitration.framework/Versions/A/DiskArbitration
0x91404000 - 0x9142afff com.apple.SystemConfiguration
1.8.6
/System/Library/Frameworks/SystemConfiguration.framework/Versions/A/SystemConfiguration
0x9143c000 - 0x91443fff libbsm.dylib /usr/lib/libbsm.dylib
0x91447000 - 0x914c0fff com.apple.audio.CoreAudio
3.0.4 /System/Library/Frameworks/CoreAudio.framework/Versions/A/CoreAudio
0x9150e000 - 0x9150efff com.apple.ApplicationServices 10.4
(???)
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/ApplicationServices
0x91510000 - 0x9153bfff com.apple.AE 314
(313)
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/AE.framework/Versions/A/AE
0x9154e000 - 0x91622fff com.apple.ColorSync
4.4.6
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ColorSync.framework/Versions/A/ColorSync
0x9165b000 - 0x916d8fff com.apple.print.framework.PrintCore 4.6
(177.13)
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/PrintCore.framework/Versions/A/PrintCore
0x91705000 - 0x917affff com.apple.QD 3.10.20
(???)
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/QD.framework/Versions/A/QD
0x917d5000 - 0x91820fff com.apple.HIServices 1.5.2
(???)
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/HIServices.framework/Versions/A/HIServices
0x9183f000 - 0x91855fff com.apple.LangAnalysis
1.6.3
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/LangAnalysis.framework/Versions/A/LangAnalysis
0x91861000 - 0x9187bfff com.apple.FindByContent
1.5
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/FindByContent.framework/Versions/A/FindByContent
0x91885000 - 0x918c2fff com.apple.LaunchServices
181
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/LaunchServices.framework/Versions/A/LaunchServices
0x918d6000 - 0x918e1fff com.apple.speech.synthesis.framework
3.4
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/SpeechSynthesis.framework/Versions/A/SpeechSynthesis
0x918e8000 - 0x91920fff com.apple.ImageIO.framework
1.4.8
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/ImageIO
0x91932000 - 0x919e4fff libcrypto.0.9.7.dylib /usr/lib/libcrypto.0.9.7.dylib
0x91a2a000 - 0x91a40fff libcups.2.dylib /usr/lib/libcups.2.dylib
0x91a45000 - 0x91a61fff libJPEG.dylib
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libJPEG.dylib
0x91a66000 - 0x91ac4fff libJP2.dylib
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libJP2.dylib
0x91ad4000 - 0x91ad8fff libGIF.dylib
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libGIF.dylib
0x91ada000 - 0x91b35fff libRaw.dylib
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libRaw.dylib
0x91b39000 - 0x91b76fff libTIFF.dylib
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libTIFF.dylib
0x91b7c000 - 0x91b96fff libPng.dylib
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libPng.dylib
0x91b9b000 - 0x91b9dfff libRadiance.dylib
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libRadiance.dylib
0x91b9f000 - 0x91b9ffff com.apple.Accelerate 1.2.2 (Accelerate
1.2.2) /System/Library/Frameworks/Accelerate.framework/Versions/A/Accelerate
0x91ba1000 - 0x91c2bfff com.apple.vImage
2.4
/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vImage.framework/Versions/A/vImage
0x91c32000 - 0x91c32fff com.apple.Accelerate.vecLib 3.2.2 (vecLib
3.2.2)
/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/vecLib
0x91c34000 - 0x91c79fff libvMisc.dylib
/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvMisc.dylib
0x91c81000 - 0x91ca6fff libvDSP.dylib
/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libvDSP.dylib
0x91cad000 - 0x92230fff libBLAS.dylib
/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
0x9226d000 - 0x9261ffff libLAPACK.dylib
/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib
0x9264c000 - 0x926d0fff com.apple.DesktopServices
1.3.4
/System/Library/PrivateFrameworks/DesktopServicesPriv.framework/Versions/A/DesktopServicesPriv
0x9270c000 - 0x9293efff com.apple.Foundation 6.4.6
(567.27)
/System/Library/Frameworks/Foundation.framework/Versions/C/Foundation
0x92a4a000 - 0x92b28fff libxml2.2.dylib /usr/lib/libxml2.2.dylib
0x92b45000 - 0x92c32fff libiconv.2.dylib /usr/lib/libiconv.2.dylib
0x92ccf000 - 0x92ccffff com.apple.Carbon 10.4
(???) /System/Library/Frameworks/Carbon.framework/Versions/A/Carbon
0x92cd1000 - 0x92ce1fff com.apple.ImageCapture
3.0.4
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/ImageCapture.framework/Versions/A/ImageCapture
0x92cef000 - 0x92cf7fff com.apple.speech.recognition.framework
3.5
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SpeechRecognition.framework/Versions/A/SpeechRecognition
0x92cfd000 - 0x92d02fff com.apple.securityhi 2.0.1
(24742)
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SecurityHI.framework/Versions/A/SecurityHI
0x92d08000 - 0x92d99fff com.apple.ink.framework 101.2.1
(71)
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Ink.framework/Versions/A/Ink
0x92dad000 - 0x92db0fff com.apple.help 1.0.3
(32.1)
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Help.framework/Versions/A/Help
0x92db3000 - 0x92dd0fff com.apple.openscripting 1.2.5
(???)
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/OpenScripting.framework/Versions/A/OpenScripting
0x92de0000 - 0x92de6fff com.apple.print.framework.Print 5.1
(192.3)
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Print.framework/Versions/A/Print
0x92dec000 - 0x92e4ffff com.apple.htmlrendering 66.1
(1.1.3)
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HTMLRendering.framework/Versions/A/HTMLRendering
0x92e73000 - 0x92eb4fff com.apple.NavigationServices 3.4.4
(3.4.3)
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/NavigationServices.framework/Versions/A/NavigationServices
0x92edb000 - 0x92ee8fff com.apple.audio.SoundManager
3.9.1
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/CarbonSound.framework/Versions/A/CarbonSound
0x92eef000 - 0x92ef4fff com.apple.CommonPanels 1.2.3
(73)
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/CommonPanels.framework/Versions/A/CommonPanels
0x92ef9000 - 0x931ebfff com.apple.HIToolbox 1.4.8
(???)
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HIToolbox.framework/Versions/A/HIToolbox
0x9b013000 - 0x9b091fff libtcl8.4.dylib /usr/lib/libtcl8.4.dylib
0x9b0ab000 - 0x9b15afff libtk8.4.dylib /usr/lib/libtk8.4.dylib
0x9b8d1000 - 0x9b98efff libX11.6.dylib /usr/X11R6/lib/libX11.6.dylib
0xc0000000 - 0xc000efff com.unsanity.ape
2.0.1
/Library/Frameworks/ApplicationEnhancer.framework/Versions/A/ApplicationEnhancer
Model: iMac4,1, BootROM IM41.0055.B03, 2 processors, Intel Core Duo, 1.83
GHz, 1.5 GB
Graphics: ATI Radeon X1600, ATY,RadeonX1600, PCIe, 128 MB
Memory Module: DIMM0/BANK 0, 1 GB, DDR2 SDRAM, 667 MHz
Memory Module: DIMM1/BANK 1, 512 MB, DDR2 SDRAM, 667 MHz
AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x89),
103.2 (3.120.28.3)
Bluetooth: Version 1.7.5f10, 2 service, 0 devices, 1 incoming serial ports
Network Service: AirPort, AirPort, en1
Network Service: Parallels Host-Guest Adapter, Ethernet, en2
Serial ATA Device: ST3160023AS, 149.05 GB
Parallel ATA Device: PIONEER DVD-RW DVR-K05
USB Device: Built-in iSight, Micron, Up to 480 Mb/sec, 500 mA
USB Device: USB Hub, Up to 12 Mb/sec, 500 mA
USB Device: Apple Optical USB Mouse, Mitsumi Electric, Up to 1.5 Mb/sec,
500 mA
USB Device: Macally iKeySlim, Macally Peripherals, Up to 1.5 Mb/sec, 500 mA
USB Device: Bluetooth HCI, Up to 12 Mb/sec, 500 mA
USB Device: IR Receiver, Apple Computer, Inc., Up to 12 Mb/sec, 500 mA
Charles Ballard wrote:
> *** For details on how to be removed from this list visit the ***
> *** CCP4 home page http://www.ccp4.ac.uk ***
>
>
> Dear All,
>
> sorry I missed the discussion, but here goes.
>
> I would dearly like to know if anyone else but me can get the ccp4
> bltwish binary to perform correctly. In particular, there has been
> a newer binary of bltwish since 9 June, which was to address the segv
> problem people have been having. This is statically linked against
> libBLT2.4, so otool -L should not report any dependency on libblt (I
> went this route because I kept on getting clashes with apple's Tcl
> framework). This was compiled using apple's gcc 4.0.0 at -O0
> otherwise the segv occurred. Latter compiler versions (latest xcode,
> fink's 4.1) might not have this problem, indeed Bill reports not
> problems using 4.1.999 from fink.
>
> Charles Ballard
>
>