I usually do it residue by residue.. but here is a version of the
program with the Natoms reset to 10000.
If you need it bigger change the value of ncc to your desired natoms -
it is line 55 - and recompile
From overlapmap.f
C ngrlim - number of grid points in map, ncc - number of CCs to be output
parameter(ngrlim=250000,ncc=10000)
Eleanor
Kumar, Abhinav wrote:
Hi,
I am running overlapmap to calculate CC between atoms in a model and
the map. The output, however, stops after 5000 atoms.
Is there a way to get it to output for the remaining atoms.
I tried spltting the model into separate chains, but the results from
the individual chains are different from the a run with the full model.
Thanks
Abhinav
Stanford Synchrotron Radiation Laboratory
Joint Center for Structural Genomics
Mail Stop 99
Phone: (650) 926-5596
Fax: (650) 926-3292
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