There is almost certainly something wrong.
Have you constructed the model? amore writes out a set of coordinates centred at the origin and gives a set of rotations and translations to be applied to these coordinates. Have you done the "construct model" step which apples the selected rotation/translations to the coordinates?

Eleanor


Garib Murshudov wrote:

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It usually means a lot of symmetry clashes. May need to do some rigid body first. (Or something wrong with cell dimensions and/or symmetry)


And: Try a version from the web page: www.ysbl.york.acuk/refmac/data
It is more tolerant to number of contacts

Garib


On 13 Oct 2006, at 20:30, olegchem wrote:

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Hi, everyone.

I tried to use Refmac5 (CCP4 6.0: Refmac_5.2.0019) to refine the model from AMoRe.

I got following error from Refmac5:

CGMAT cycle number =      4
Too many atoms in one brick.
Maximum allowed in one brick =         60
Check symmetry, cell dimensions
===> Error: CREATE_NET failed
Refmac_5.2.0019:  CREATE_NET failed

Could I, please, get some help to solve this problem?

Thank you,

Oleg Zadvornyy








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