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Y. -F. Li wrote:
Hello,
Is there a program for calculating the center of gravity? For a
2-domain structure, what is the best and acurate way to measure the
angle between the two domains?
Thanks,
Yong
You get a center of mass if you look into the stats of moleman. The
angle depends somehow on what you think moves and is pretty subjective
(somtimes). If you have alpha helices which moves to respect to each
other than it's easy, but with whole domains ... You could perhaps (if
nothing else changes) use the center of masses and draw some lines.
Juergen
--
Jürgen Bosch
Howard Hughes Medical Institute and
University of Washington
Dept. of Biochemistry, K-426
1705 NE Pacific Street
Seattle, WA 98195
Box 357742
Phone: +1-206-616-4510
FAX: +1-206-685-7002
