conancao wrote:
> Dear all:
>
> I have problem to supperimpose 2 homologous proteins(only one subunit
> is homologous) in coot.Could anybody give suggestion either using coot
> or other easily availabe software to superimpose homologous
> structures(pdb) and give a finial superimposed pdb or picture. Thank you.

See subsection 4.20 Secondary Structure Matching (SSM)
<http://www.ysbl.york.ac.uk/%7Eemsley/coot/doc/chapters/user-manual_4.html#SEC86>
of the Coot User Manual.

http://www.ysbl.york.ac.uk/~emsley/coot/doc/chapters/user-manual_4.html#SEC86

Paul.

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