What is the best and user-friendly program to calculate a surface of the
interface between two proteins? Or two domains?

 

Is there any common criteria how to define boundary for that interface
(other than van der Waals distance)?

 

Thanks in advance for good tips - Ewa

 

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Dr Ewa Skrzypczak-Jankun                                      Associate
Professor

University of Toledo                                        Office:
Dowling Hall r.2257

Health Science Campus                                       Phone:
419-383-5414

Urology Department Mail Stop #1091                  Fax:
419-383-3785

3000 Arlington Ave.                                         e-mail:
[EMAIL PROTECTED]
<mailto:[EMAIL PROTECTED]> 

Toledo OH 43614-2598                                  web:
http://golemxiv.dh.meduohio.edu/~ewa
<http://golemxiv.dh.meduohio.edu/~ewa>  

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