Hi!
To my knowledge one could use the program GRID available on
http://www.moldiscovery.com/soft_grid.php to calculate the hydrophobic
molecular-interaction field on the surface of the protein. But I guess
it comes with a small license fee for academic users.
Best Regards,
Madhu
Sebastiano Pasqualato wrote:
Hi all,
I'd love to have a surface representation of my structure in which I
plot the hydrophobic exposed residues.
A bit like an electrostatic potential plotted onto the surface, but
rather than hydrophilic, an hydrophobic one.
Is there a nice web server or a program that does that or you guys
just color hydrophobic amino acids and show the surface?
Thanks in advance,
s
--
---------------------------------------------------------------
Madhumati Sevvana, PhD
Lehrstuhl fuer Biotechnik (Im IZMP)
Friedrich-Alexander-Universitaet
Henkestr. 91, D-91052
Erlangen, Germany
Email [EMAIL PROTECTED]
Phone +49 (0)9131 85 23083
Fax +49 (0)9131 85 23080
---------------------------------------------------------------
