In the paper "Computational analyses of the surface properties of
protein-protein interfaces" Acta Cryst. (2007). D63, 50-57, it is described how
to do it using a GRID-type hydrophobic potential in CCP4MG. However, I could not
find the corresponding menus in CCP4MG when I (quickly) tried.
Michele
Sebastiano Pasqualato wrote:
Hi all,
I'd love to have a surface representation of my structure in which I
plot the hydrophobic exposed residues.
A bit like an electrostatic potential plotted onto the surface, but
rather than hydrophilic, an hydrophobic one.
Is there a nice web server or a program that does that or you guys
just color hydrophobic amino acids and show the surface?
Thanks in advance,
s
