PDBSum is the easiest to use for this, and some other useful information: http://www.ebi.ac.uk/pdbsum/
Bernie On Mon, November 10, 2008 12:34 pm, hari jayaram wrote: > Hi CharuEspript is an excellent resource for this > It is particulary useful when you want a secondary structure schematic > with > an alignment and other information relevant to the structure .. .It has a > friendly web interface at > http://espript.ibcp.fr/ESPript/ESPript/ > > Fr eg > http://espript.ibcp.fr/ESPript/ESPript/images/vp7.gif > > Hope this Helps > Hari Jayaram > > > On Mon, Nov 10, 2008 at 1:53 PM, Charu Chaudhry > <[EMAIL PROTECTED]>wrote: > >> Hello, >> Does anyone know of a program that can automatically generate a folding >> pattern schematic diagram showing the arrangement of secondary structure >> elements for a protein ? Presumably one would have to feed it a PDB file >> with secondary structure assigned from DSSP. >> Thanks! >> Charu >> Mayer lab/NIH >> >
