Dear Paul, I, and probably many coot users, would appreciate it very much if you could add a "create covalent link" option in coot instead of having us wade through 8 pages of instructions and hoping that we put exactly the right number of space characters in the link record.
Best regards, Herman -----Original Message----- From: CCP4 bulletin board [mailto:[email protected]] On Behalf Of Paul Emsley Sent: Tuesday, March 16, 2010 1:03 AM To: [email protected] Subject: Re: [ccp4bb] how to make covalent bond between ligand and protein residue in coot? lei feng wrote: > > > I am wondering how to make covalent bond in coot, between a modified > substrate and regular protien residue > > I can not figure out how to make the bond. That is, perhaps, because making a bond is not up to Coot - it's a "dictionary thing". Have a look here: http://www.ysbl.york.ac.uk/mxstat/JLigand/1.html You probably want 2b. (If you want to display the bond in Coot, you'll probably need a LINK record.) Paul.
