Ciao Alessandra,
A couple of pointers:
http://gbio-pbil.ibcp.fr/Curves_plus/Curves+.html
http://rutchem.rutgers.edu/~xiangjun/3DNA/
HTH,
Luca
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Luca Jovine, Ph.D.
Group Leader & EMBO Young Investigator
Karolinska Institutet
Department of Biosciences and Nutrition & Center for Biosciences
Hälsovägen 7, SE-141 57 Huddinge, Sweden
Voice: +46.(0)8.6083-301 FAX: +46.(0)8.6081-501
E-mail: [email protected]
W3: http://jovinelab.org
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On Apr 9, 2010, at 10:25 AM, Alessandra Pesce wrote:
> Dear All,
> I am looking for available programs and/or websites able to check the
> structure of DNA in DNA-protein complexes. I need to evaluate the DNA
> bending, its backbone distortion, the alteration of the base pairing, and its
> interaction with the protein. The aim is to compare in easy and quick way
> different conformation of DNA in different DNA-protein complexes. Can anybody
> help me?
> Thanks in advance.
> Cheers
> Alessandra
>
> *************************************************************
> Alessandra Pesce, PhD
> Department of Physics
> University of Genova
> Via Dodecaneso 33
> 16146 Genova, Italy
>
> Tel.(DIFI) ++39 010 353 6243 | 6309
> e-mail [email protected]
> *************************************************************
