I know two programs;
3DNA by Lu and curves by Lavery and Sklenar. 3DNA is easier to use, it
can also make input for the Curves.
Maia
Alessandra Pesce wrote:
Dear All,
I am looking for available programs and/or websites able to check the
structure of DNA in DNA-protein complexes. I need to evaluate the DNA
bending, its backbone distortion, the alteration of the base pairing,
and its interaction with the protein. The aim is to compare in easy
and quick way different conformation of DNA in different DNA-protein
complexes. Can anybody help me?
Thanks in advance.
Cheers
Alessandra
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Alessandra Pesce, PhD
Department of Physics
University of Genova
Via Dodecaneso 33
16146 Genova, Italy
Tel.(DIFI) ++39 010 353 6243 | 6309
e-mail [email protected] <mailto:[email protected]>
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