Hi Jacob,
Give SSBOND a try at http://129.128.24.248/forms/ssbond.html
Just upload your pdb and it will spit out pairs of residues that, if
mutated to cysteine, are able to form disulfides. For multi-domain
proteins I recommend to change residues numbers to 1-999 for chain A,
1001-1999 for chain B, etc. since the chain labels are not printed out.
Bart
On 10-08-23 04:41 PM, Jacob Keller wrote:
Dear Crystallographers,
I remember having heard of a program which takes a given oligomeric
assembly, and suggests optimum disulfides to stablize the complex. Can
someone refresh my memory which program that is, and where it is
available?
Best Regards,
Jacob Keller
*******************************************
Jacob Pearson Keller
Northwestern University
Medical Scientist Training Program
Dallos Laboratory
F. Searle 1-240
2240 Campus Drive
Evanston IL 60208
lab: 847.491.2438
cel: 773.608.9185
email: [email protected]
*******************************************
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Bart Hazes (Associate Professor)
Dept. of Medical Microbiology& Immunology
University of Alberta
1-15 Medical Sciences Building
Edmonton, Alberta
Canada, T6G 2H7
phone: 1-780-492-0042
fax: 1-780-492-7521
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