--- pdbset xyzin foo.pdb xyzout foofoo.pdb << eof PICK N O CA C CB eof ---
should do it On Fri, 2011-02-11 at 18:03 -0500, crystallogrphy wrote: > Hi, > I am refining a low resolution data (4.7A). I want to cut off all side > chains from my model because they cannot be seen from the density. > Phenix pdbtools can only keep the backbone, but cannot keep the Cbeta > atom. What program I can use to cut off all the side chain, but keep > the Cbeta atoms? > > Thanks! > _______________________________________________ > phenixbb mailing list > [email protected] > http://phenix-online.org/mailman/listinfo/phenixbb -- Edwin Pozharski, PhD, Assistant Professor University of Maryland, Baltimore ---------------------------------------------- When the Way is forgotten duty and justice appear; Then knowledge and wisdom are born along with hypocrisy. When harmonious relationships dissolve then respect and devotion arise; When a nation falls to chaos then loyalty and patriotism are born. ------------------------------ / Lao Tse /
