Hi all,

This may be of interest to those methods developers amongst us who are ogling
the rich potential bounties to be reaped by applying low-resolution X-ray
model-building and refinement methods to EM maps...

--Gerard


---------- Forwarded message ----------

Date: Thu, 12 May 2011 07:52:48 -0500
From: Steven Ludtke <[email protected]>
Subject: [3dem] Call for papers for a special issue on Cryo-EM based modeling

In the last 1/2 of 2010, Helen Berman, Gerard Kleywegt, Wah Chiu, Cathy Lawson and I sponsored the first Cryo-EM Modeling Challenge (http://ncmi.bcm.edu/challenge) and an accompanying workshop at PSB 2011. The challenge was quite successful with 136 models submitted by 10 different research groups, using 13 different software packages.

We have now arranged for a special issue of Biopolymers (http://onlinelibrary.wiley.com/journal/10.1002/%28ISSN%291097-0282) to cover the results of the challenge as well as any new results completed after the end of the original challenge. All challenge participants have been encouraged to submit a full manuscript documenting their results. In addition, researchers in cryo-EM based modeling who were unable to participate in the original challenge are also welcome to participate in the special issue. A prerequisite for doing so is to apply your methods to one or more of the standard test models used for the challenge, and submit the new results to the challenge server for public access.

The deadline for submission of completed manuscripts is November 1st. Clearly some time will be allowed for necessary review and minor revisions, though there is no guarantee of final acceptance. Articles may be either mini-communications or regular articles as described on the journal web site. Submissions should be made directly to the journal with a cover letter clearly stating that your submission is targeted at the special issue. The submission system will also have an area where the special issue can be indicated in the submission form. The review process will be handled by Associate Editor Bob Glaeser, with advice from the Challenge organizers. While not absolutely required, we would greatly appreciate if you would send a short note to me ([email protected]) indicating your intent to submit a manuscript before July 1. This will help us and the journal plan the timing and size of the issue. Please email me directly with any specific questions.

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Steven Ludtke, Ph.D.
Associate Professor
Co-Director National Center For Macromolecular Imaging
Dept of Biochemistry and Mol. Biol.
Baylor College of Medicine
[email protected]
[email protected]

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