On 18 Aug 2011, at 09:29, Eric Karg wrote: > Thanks Huw. Unfortunately I have the same problem when using the new > libraries. Maybe it has something to do with the pdb file (output from > Phaser) I'm trying to refine. Do I have to rename the residues in the pdb > file or is there another trick?
Yes RNA with the old syntax won't work with the new dictionary - but then it would have worked with the old one (I've just checked that). Can you paste a nucleotide from the problem PDB into an email to the BB and also say what atoms coot is failing to match in real-space refinement. The versions of Phaser and Coot would be useful too! Thanks, Huw -- Dr Huw Jenkins Astbury Centre for Structural Molecular Biology University of Leeds
