Dear Crystallographers,

I cannot get BLAST to find all proteins with the motif cxcxcxc or at
least cxcxc. It seems to think of "x" as an actual amino acid rather
than a wildcard. There must be some easy way to do this? Ordinarily to
find a short motif, I would just paste the sequence and get the
answer, but here the C's are an absolute requirement and there is no
constraint on the x's except that they be only one residue.

JPK

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Jacob Pearson Keller
Northwestern University
Medical Scientist Training Program
cel: 773.608.9185
email: [email protected]
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