I once saw a figure showing the protein as surface, but instead of having it coloured by atom type or potential, it was shown by percent conservation in the family. Something like red highly conserved, all the way to white, not conserved at all... Now, I assume the figure was done by uploading aligned sequnces of several members of a family, and the colouring the generated surface accordingly. Does anyone know a way to do this more elegantly than what I tried doing? ps. I quit colouring them manually after I remebered my protein was 407 aa long...
- [ccp4bb] Efficient way of showing residue conservation Yuri Pompeu
- Re: [ccp4bb] Efficient way of showing residue conse... James Stroud
- Re: [ccp4bb] Efficient way of showing residue conse... Bostjan Kobe
- Re: [ccp4bb] Efficient way of showing residue c... Petr Leiman
- Re: [ccp4bb] Efficient way of showing resid... Francois Berenger
- Re: [ccp4bb] Efficient way of showing r... Petr Leiman
- Re: [ccp4bb] Efficient way of showing residue c... Joel Sussman
- Re: [ccp4bb] Efficient way of showing residue conse... Petr Leiman
- Re: [ccp4bb] Efficient way of showing residue conse... Boaz Shaanan
- Re: [ccp4bb] Efficient way of showing residue conse... Mads Gabrielsen
