If you install the .tcl update from the CCP4 site, you will find the clash menu setting under advanced options, IIRC.
Roger Rowlett On Jun 20, 2012 6:08 PM, "Santarsiero, Bernard D." <b...@uic.edu> wrote: > The new CCP4I interface for PHASER removed the menu item where you could > change the number of clashes. It's not set as a default to 5% of the > number of C-alpha atoms. Where is the default file? > > I found the phaser_MR.def file in share/ccp4i/tasks, and changed the > parameter value, but it still used the default of 5%. > > Thanks, > > Bernie > -- > Bernard D. Santarsiero > Research Professor > Center for Pharmaceutical Biotechnology and the > Department of Medicinal Chemistry and Pharmacognosy > Center for Structural Biology > Center for Clinical and Translational Science > University of Illinois at Chicago > MC870 3070MBRB 900 South Ashland Avenue > Chicago, IL 60607-7173 USA > (312) 413-0339 (office) > (312) 413-9303 (FAX) > http://www.uic.edu/labs/bds >
