Dear Dr. Frolow Thank you for your mail. I stated again, and hope it is clear now. TA.
On Fri, Jan 11, 2013 at 4:11 AM, Felix Frolow <[email protected]>wrote: > > On Jan 10, 2013, at 18:27 , Teri Arman <[email protected]> wrote: > > Hi, I appreciate If anybody help me couple of things as follows. > > > > (a1) how multiple PDBs (of same or different space groups) can be > brought into one frame of coordinates, when dealing with many PDBs? > TA: Suppose we have a segment of structure (PDB). That segment carries different co-ordinates in different PDBs. How can that segment from hundreds of PDBs be converted so that we can see all converted segments in one frame/window I like to avoid superimposition of hundreds of times > You mean that axes of inertia of the same molecule in the different > structures(PDB's) - L,M,N are superimposed? You superimpose… :-) > > > > > (a2) how does one get scatter plot? > Scatter of what? :-0 > > TA: Suppose a surrounding neighbours of a segment as said above. > > > (b) how easily can symmetry related units of original PDB (with > description of which symmetry element has been used) be made when dealing > with many PDBs . > > You have to explain better what are you meaning. :-\ > > TA: Each PDB (X-ray structures) has its own space group. I like to > generate symmetry related whole PDB or a segment of it in hundreds of PDBs > of different space groups. > > > > > Thank you, > > Teri > > > > Dr Felix Frolow > Professor of Structural Biology and Biotechnology, Department of Molecular > Microbiology and Biotechnology > Tel Aviv University 69978, Israel > > Acta Crystallographica F, co-editor > > e-mail: [email protected] > Tel: ++972-3640-8723 > Fax: ++972-3640-9407 > Cellular: 0547 459 608 > >
