-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Dear Chen,
lsqman, lsqkab, and most likely coot should be able to do this. Best, Tim On 03/14/2013 09:53 PM, Chen Zhao wrote: > Dear all, > > I am now struggling to align two 3D RNA structures. I know there > are a bunch of web servers, but they either just generated a pdb > file with a single "aligned" structure, or they left the ligand > out. > > Does any of you have some recommendations? > > Alternatively, is there some software that can calculate the > transformation matrix between the coordinates in 2 pdb files? Then > I could add the ligand back by myself. I suspect that Matlab is > able to do this, but I would save it as the last resort. > > Thank you so much! > > Best, Chen > - -- Dr Tim Gruene Institut fuer anorganische Chemie Tammannstr. 4 D-37077 Goettingen GPG Key ID = A46BEE1A -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.12 (GNU/Linux) Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/ iD8DBQFRQjrYUxlJ7aRr7hoRArxwAJ4wNRFJWiJ5V4Vfn10yMAS9UrVC7ACfcC8+ Uciknls+q1i8vHKKkYeoDw8= =8Eg+ -----END PGP SIGNATURE-----
