Dear all,

Does anybody know some softwares for aligning electron density maps?

I tried transforming map by SQL model fit extension in COOT, which turned
out to be not working: the map it transformed is the one supposed to be
fixed. If I switch the moving model with the reference model, I only got
some error messages.

I also tried the "Superpose maps" utility in PHENIX, however, since they
are nucleic acid structures, it seems that the sequences cannot be
recognized.

Thank you very much!

Best,
Chen

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