I want to build the loop based on a computer screen against my peptide. Thanks
Wenzong ----- Original Message ----- From: "Joel Tyndall" <[email protected]> To: "Wenzong Li" <[email protected]>, [email protected] Sent: Monday, April 22, 2013 6:10:09 PM Subject: RE: [ccp4bb] Modelling Software for beta turn design Dear Wenzong, Could you provide a bit more details please? Do you simply require some visualisation tool e.g. pymol to superimpose your turn mimic on your protein/peptide structure or are you looking for more indepth modelling to say identify new scaffolds to build amino acid sidechains onto based on an insilico screen against your peptide? The latter requires more high end software Cheers Joel -----Original Message----- From: CCP4 bulletin board [mailto:[email protected]] On Behalf Of Wenzong Li Sent: Monday, 22 April 2013 3:48 p.m. To: [email protected] Subject: [ccp4bb] Modelling Software for beta turn design Dear All, I want to use modelling software to design a tight beta turn replacing a loop between two beta strands. Can anyone suggest a program to do this sort of modelling? Thank you Wenzong
