If you play around with the settings you can do something similar (this is
for surface, but should work for spheres also)
http://www-cryst.bioc.cam.ac.uk/members/zbyszek/figures_pymol#cut

mvh
Folmer


2013/9/5 Ethan A Merritt <[email protected]>

> On Thursday, 05 September, 2013 13:30:21 Arthur Glasfeld wrote:
> > I am hoping to create some images of protein cross-sections where the
> atoms are depicted as spheres, and the spheres that are "cut" by the slab
> are shown as solids with the same color as the surface.  An example of what
> I'm after can be found here:
> >
> > people.reed.edu/~glasfeld/xsection.jpg
> >
> > Does anyone know of any software that can produce similar images?
>
>         http://skuld.bmsc.washington.edu/raster3d/raster3d.html
>
>
> >
> > Thanks,
> >
> > Arthur Glasfeld
> > Reed College
> > Portland, OR
>



-- 
Folmer Fredslund

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