Dear David, mrtailor-gui (http://shelx.uni-ac.gwdg.de/~tg/research/programs/mrtailor/) might do this if you have the sequence file in clustalx format, although I have not tested mrtailor w.r.t. insertion code due to lack of an example. If you cannot get it to work, I would not mind to use your PDB file to improve the program, if you wouldn't mind sending it.
Best, Tim On 05/22/2014 06:34 PM, Hargreaves, David wrote: > Dear CCP4bb, > > Does anyone know a simple way to get rid of residue number insertion codes > and then renumber residues normally in pdb files? > > Help much appreciated, > > David > > > David Hargreaves > Associate Principal Scientist > _____________________________________________________________________ > AstraZeneca > Discovery Sciences, Structure & Biophysics > Mereside, 50F49, Alderley Park, Cheshire, SK10 4TF > Tel +44 (0)01625 518521 Fax +44 (0) 1625 232693 > David.Hargreaves @astrazeneca.com<mailto:[email protected]> > > Please consider the environment before printing this e-mail > > > -------------------------------------------------------------------------- > AstraZeneca UK Limited is a company incorporated in England and Wales with > registered number: 03674842 and a registered office at 2 Kingdom Street, > London, W2 6BD. > Confidentiality Notice: This message is private and may contain confidential, > proprietary and legally privileged information. If you have received this > message in error, please notify us and remove it from your system and note > that you must not copy, distribute or take any action in reliance on it. Any > unauthorised use or disclosure of the contents of this message is not > permitted and may be unlawful. > Disclaimer: Email messages may be subject to delays, interception, > non-delivery and unauthorised alterations. Therefore, information expressed > in this message is not given or endorsed by AstraZeneca UK Limited unless > otherwise notified by an authorised representative independent of this > message. No contractual relationship is created by this message by any person > unless specifically indicated by agreement in writing other than email. > Monitoring: AstraZeneca UK Limited may monitor email traffic data and content > for the purposes of the prevention and detection of crime, ensuring the > security of our computer systems and checking Compliance with our Code of > Conduct and Policies. > -- Dr Tim Gruene Institut fuer anorganische Chemie Tammannstr. 4 D-37077 Goettingen GPG Key ID = A46BEE1A
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