Thank all of you!
I have not " change the residue numbers so they do not overlap", so the
"change chain IDs" doesn't work when I try to change chain ID to an existed
chain ID.
Edit the PDB file is another good idea but when I have 20 SO4 in 20 chains,
things become boring.
Best wishes!
Lu zuokun
--
卢作焜
南开大学新生物站A202
At 2014-10-23 20:03:03, "Robbie Joosten" <[email protected]> wrote:
>Dear Lu,
>
>You could do this in Coot as well if you are uncomfortable doing this in a
>text editor. First change the residue numbers so they do not overlap, then
>change the chainID.
>Rather than putting all your sulfates in a separate chain, it is better to add
>them to the correct protein chain. PDB annotation will do this upon deposition
>otherwise. You should also give NCS-related sulfates (if you have any), the
>same residue number. It makes it easier to deal with them in the future.
>
>Cheers,
>Robbie
>
>> -----Original Message-----
>> From: CCP4 bulletin board [mailto:[email protected]] On Behalf Of
>> Ed Pozharski
>> Sent: Thursday, October 23, 2014 13:37
>> To: [email protected]
>> Subject: Re: [ccp4bb] Merge PDB chains
>>
>> Edit the ATOM records?
>>
>>
>> Sent on a Sprint Samsung Galaxy S® III
>>
>>
>> -------- Original message --------
>> From: luzuok
>> Date:10/23/2014 6:51 AM (GMT-05:00)
>> To: [email protected]
>> Subject: [ccp4bb] Merge PDB chains
>>
>> Dear all,
>> Sorry to ask a simple question. There are many SO4 in my PDB file, one
>> belongs to a different chain. I want to merge them into one chain, can
>> anyone tell me how to do this?
>>
>> Best regards!
>>
>> Lu Zuokun
>>
>>
>>
>>
>> --
>> 卢作焜
>> 南开大学新生物站A202
>>
