Coot thinks that PISA version is < 1.06, although it's 2.0.2.
That coot extension (and many others) have two versions, one in Scheme
and one in Python. The latter works, but it's not in the menu. As a
workaround: Calculate > Scripting > Python and type:
molecule_chooser_gui("Choose molecule", pisa_interfaces)
and press Enter.
Or pisa_assemblies instead of pisa_interfaces, depending what you want.
BTW you can only issue one command in that little window,
the second one gives error:
File
"/home/wojdyr/ccp4/ccp4-6.5/lib/python2.7/site-packages/coot/coot_gui.py", line
125, in warning_event
tag1 = textbuffer.create_tag(foreground="red",weight=pango.WEIGHT_BOLD)
NameError: free variable 'textbuffer' referenced before assignment in enclosing
scope
Marcin
On Mon, Feb 09, 2015 at 05:20:41PM +0100, Maria Jose Sanchez Barrena wrote:
> Dear all,
> I am using Coot 0.8.1, that is part of the CCP4 version 6.1. When trying to
> run PISA from Coot, after choosing the pdf file, I get the following message:
> “your pisa version is too old. Need at least v1.06”. However, when running
> CCP4mg (part of the same CCP4 package), I am able to run PISA and get these
> wonderful interaction surfaces and so on…
> I find all this quite difficult to understand…. Any suggestion about what´s
> going on?
>
> Many thanks in advance,
>
> Maria José
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