The process failed. You mean it didn’t process the data past the indexing routine? That just means you need to actually change some values and type in a couple of commands into XDS.INP - not everything can be designed to be point & click.
Look at IDXREF.LP and check out what the suggested space group is, then change that in XDS.INP and provide the correct cell dimensions. Change the JOB card to start with DEFPIX and remove the previous sub routines. Look at the manual of XDS on Kabsch’s website. Jürgen ...................... Jürgen Bosch Johns Hopkins University Bloomberg School of Public Health Department of Biochemistry & Molecular Biology Johns Hopkins Malaria Research Institute 615 North Wolfe Street, W8708 Baltimore, MD 21205 Office: +1-410-614-4742<tel:%2B1-410-614-4742> Lab: +1-410-614-4894<tel:%2B1-410-614-4894> Fax: +1-410-955-2926<tel:%2B1-410-955-2926> http://lupo.jhsph.edu On May 10, 2015, at 4:30 AM, luzuok <[email protected]<mailto:[email protected]>> wrote: Dear all, Thank you for all your excellent suggestions! The XDS package now works smoothly in xdsapp in my Linux. Unfortunately, due to the data quality or maybe my ability, the process was failed. Best wishes! Lu Zuokun -- 卢作焜 南开大学新生物站A202 At 2015-05-08 03:39:07, "Clemens Vonrhein" <[email protected]<mailto:[email protected]>> wrote: >Dear Lu, > >apart from the other excellent advice you got: autoPROC is another >pipeline that uses XDS under the hood (among other tools) and tries to >take most of the pain out of getting started with XDS. For free (to >academics) licences/download please see > > http://www.globalphasing.com/autoproc/ > >Cheers > >Clemens > >On Thu, May 07, 2015 at 04:33:38PM +0800, luzuok wrote: >> Dear all, >> I'm a XDS beginner and the first problem I encounter was the INP file. >> The detector type is MX300. Is the detector supported by XDS? How to >> modified the INP file? >> The sitefile of HKL2000 was attached. >> Can anyone provide some tutorial to use XDS? >> >> Best wishes! >> >> Lu zuokun >> >> >> >> >> >> >> >> -- >> 卢作焜 >> 南开大学新生物站A202 > >> [-- octet-filter file type: "ASCII text" --] >> >> HKLSuite0.95SITE >> {alig,1} {180} >> {beamline_name} {BL17B} >> {cass,rotx} {-0.119} >> {cass,roty} {-0.167} >> {crossx} {0.044} >> {crossxy} {0.009} >> {crossy} {0.001} >> {detec} {CCD unsupported-m300} >> {extension} {*.mccd} >> {last_saved,chix} {3.24} >> {last_saved,chiy} {1.65} >> {last_saved,date} {17:11:17 Apr 19, 2015} >> {last_saved,user} {17bdata1} >> {polar} {0.99} >> {rotation_axis} {Phi} >> {synchrotron_name} {SSRF} >> {xbeam} {149.336} >> {y_scale} {1} >> {ybeam} {145.711} > > >-- > >*************************************************************** >* Clemens Vonrhein, Ph.D. vonrhein AT GlobalPhasing DOT com >* >* Global Phasing Ltd. >* Sheraton House, Castle Park >* Cambridge CB3 0AX, UK >*-------------------------------------------------------------- >* BUSTER Development Group (http://www.globalphasing.com) >***************************************************************
