It could be, but could you attach the whole REFMAC log file ? ( you can find that in the CCP4_JOBS/job_n/ directory)
Maybe there are no atoms in your COOT output.pdb? If so REFMAC does fail rather ungracefully! Eleanor On 29 December 2016 at 12:45, Alun R Coker <[email protected]> wrote: > Hi Everyone, > > I'm getting the following error when exiting coot on ccp4i2: > > Error Report for Job 43: Manual model building - COOT > > -ERROR- Ccoot_rebuild:202 > > Error in wrapper coot_rebuild 0.0:: Failed in processOutputFiles > Data harvesting failed > -ERROR- Ccoot_rebuild:45 Error in wrapper coot_rebuild 0.0:: Error in > processing output files > > I saved the model before I exited. > > I'm also getting a similar error for Refmac: > Error Report for Job 42: Refinement - REFMAC5 > > -ERROR- None:201 Error in wrapper refmac 0.0:: Refmac > returned with non zero status > Exit code: 1 > > Is this a problem with CCP4i2? > > All the best, > > Alun > > > -- > Dr Alun R. Coker > Senior Lecturer > Wolfson Institute for Biomedical Research > University College London > The Cruciform Building > London > WC1E 6BT > > Tel: 020 7679 6703 Ext 46703 > Web: www.ucl.ac.uk/pxmed > >
