Dear Jessica,

You can try http://manoraa.org for ligand interaction observation. This server 
helps you to observe structural conservation environment of any  ligand in the 
PDB by clicking atoms versus PDB chains you want to superpose on. If you 
classify HEME into different UNIPROT, you can see where the major differences 
in atomic conservation from each set lies. You can also select a partial 
fragment of HEME that you want to characterise the interaction types for each 
ligand-residues partners too. 

Just type in 'HEM' on the three letter code panel of this URLs 

http://manoraa.icbs.mahidol.ac.th/Manoraa/


Best wishes,
Duangrudee

Duangrudee Tanramluk, Ph.D.
Institute of Molecular Biosciences, Mahidol University
Puttamonthon 4 Rd., Salaya, Nakhon Pathom 73170 THAILAND

########################################################################

To unsubscribe from the CCP4BB list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1

Reply via email to