Dear community,

I would really appreciate your suggestions for linking cysteine sulfenic
acid (one of the active site amino acid residues in my target protein) to
rest of the protein chain. Let me summarize what I did so far in coot  -

1. I deleted the native cysteine residue at that location, then brought
cysteine sulfenic acid from the monomer library, then fit it in the density
and merged it, then ran refinement by refmac5, the entity fits really well
but the link is not established after the refinement .

2. In my version of coot (wincoot) I could not find "Extensions > Modelling
> Replace Residue"...option to change it.

Thanks in advance for your suggestions and happy holidays!

Best regards,
Sudipta


-- 
Sudipta Bhattacharyya, PhD
Assistant Professor,
Department of Bioscience and Bioengineering,
Indian Institute of Technology Jodhpur,
Rajasthan, India.

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