Re: [ccp4bb] protein protein interactions

Mon, 10 Feb 2020 11:07:58 -0800

Hello, if you mean theoretical docking, here is an old list of links:

https://zlab.umassmed.edu/zdock/dockingsites.shtml

Some of these will still be maintained.

Jon Cooper

On 10 Feb 2020 16:50, Sarah Bowman <[email protected]> wrote:

Hi Careina,

 

There’s a program called FRODOCK that generates predictions of how two proteins could interact:

http://chaconlab.org/modeling/frodock

 

Cheers,

Sarah

 

Sarah EJ Bowman, PhD

 

Associate Research Scientist, Hauptman-Woodward Medical Research Institute

Director, High-Throughput Crystallization Screening Center

 

Research Webpage

www.getacrystal.org

 

 

From: CCP4 bulletin board <[email protected]> on behalf of "[email protected]" <[email protected]>
Reply-To: "[email protected]" <[email protected]>
Date: Monday, February 10, 2020 at 11:17 AM
To: "[email protected]" <[email protected]>
Subject: Fw: protein protein interactions

 

 

 

Dear all

Apologies for off topic question but can anyone recommend good programs for identifying docking interfaces between two proteins. I do not know that these two proteins interact. I would like a level of confidence on a possible interaction. is there a good program to do this?

kind regards

Careina

 

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