On 12/03/2020 09:14, Joël Bloch wrote:

Is there any way in Coot 0.8.9.2 to remove/hide the red trapezoids that are 
indicating planar bonds?

I couldn’t find anything on that, neither in the manual nor FAQ.


(Good for you for reading the documentation)

The red trapezoids represent cis peptides that are in front of a residue that is not a proline. They are quite rare (but less so in carbohydrate binding proteins (why should that be? is that what you have?)).

Calculate -> Scripting -> Python
set_draw_cis_peptide_markups(0)

Paul.

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