I believe you need to establish the "environment" before running certain CCP4 
programs.
Something like

source /where/ever/ccp4-8.0/bin/ccp4.setup-sh

HTH,
Kay

On Mon, 26 Sep 2022 21:32:42 +0100, Zhen Gong <[email protected]> wrote:

>Dear CCP4 developers and users,
>
>I am trying to run CCP4 sc but encountered an error: 
>
>
>>>>>>> CCP4 library signal ccp4_general:Cannot open environ.def (Error)
>        raised in ccp4fyp <<<<<<
> sc:  Cannot open environ.def
> sc:  Cannot open environ.def
>
>
>Here is my command: 
>
>sc xyzin test.pdb <<eof
>> MOLecule 1
>> CHAIN A and B
>> MOLecule 2
>> CHAIN R
>> eof
>
>I am using a Mac (macOS Monterey version 12.5) and CCP4Interface 8.0.004.
>
>Can anyone please help? Many thanks in advance!
>
>Best,
>Zhen
>
>########################################################################
>
>To unsubscribe from the CCP4BB list, click the following link:
>https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1
>
>This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing 
>list hosted by www.jiscmail.ac.uk, terms & conditions are available at 
>https://www.jiscmail.ac.uk/policyandsecurity/

########################################################################

To unsubscribe from the CCP4BB list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1

This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list 
hosted by www.jiscmail.ac.uk, terms & conditions are available at 
https://www.jiscmail.ac.uk/policyandsecurity/

Reply via email to