Hello All, I am trying to solve a protein/nucleic acid (na) structure. The density for na is poor and MR is less straightforward, so I used ModelCraft for automated phasing, rebuilding and improving the electron density. It has built a partial model for the complex, which looks somewhat reasonable, however, the protein and na chains are fragmented, which throws off numbering, etc. I'm sure this is expected, but I typically don't do automated rebuilding (necessary in this case).
Is there any way to easily connect and renumber the chains and residues (perhaps using a reference PDB structure) to try and build something more complete (in terms of chains and residues)? I have not worked with a protein/na complex so certainly na modeling is new to me. Any input is greatly appreciated! Thanks for your expertise, Shawn ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
