Hi Michael New version coming on Friday. Should fix the issues.
You will be able to upgrade using ccp4um Sorry for the issues Charles From: CCP4 bulletin board <[email protected]> on behalf of Michael Weyand <[email protected]> Date: Thursday, 16 February 2023 at 07:30 To: ccp4bb <[email protected]> Subject: [ccp4bb] CCP4 8.0.008 Python2 <-> 3 problem Dear colleagues, First, I don't want to flood ccp4bb with all the concrete program error code(s). Therefore a more general description. I can give more details if needed. To the board or by direct mails to the real experts. I would like to use the Panndda/PanDEMIC<https://pandda.bitbucket.io/index.html> tools within our CCP4 environment (version 8.0.008) but I ran in some Python issues, although CCP4 patch 8.0.005 claimed various py3 Python fixes for Pandda. Even more by using the 2to3<https://docs.python.org/3/library/2to3.html> Python version converter I found a number of Python3 (syntax and more) issues in the main CCP4 Python3 folder/subfolders at /ccp4/ccp4-8.0/lib/python3.7/site-packages/ Since my OS (openSuSE Leap 15.4) still comes with both Python version 2.7 and 3.6 and CCP4 now comes (to my knowledge) with 3.7 I am confused what I have to correct/change to use the Pandda tools. By my error tracking I'm pretty sure that PATH and PYTHONPATH are directing to the CCP4 folders, but may be I'm wrong ... And/or what was changed to the Pandda tools in the 8.0.005 CCP4 patch? Obviously, they are not working at my site ... :-( For instance, all Pandda scripts are still coming with a Python3 obsolete program option "-Q" ?!?! Was my 8.0.005 patch not properly executed? CCP4i teils me nothing. It is a shame but my Python knowledge is more than limited. Therefore I ran 2to3 for all Pandda scripts but then main CCP4 Python tools/scripts showed up, again with some syntax errors (= missing version 2/3 conversion ??) in the code. After also correcting these first 2-3 issues there were - by executing "pandemic.adp" - still more and more Python issues appearing... Now I asked my self, what is wrong with my CCP4 installation? According to patch 8.0.005 these tools should run !! And why are there version 3 issues beyond the CCP4 python3.7 folder ?? I'm confused. Any help is highly appreciated. Best, Michael ________________________________ To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
