Just in case something like this happens to someone else:
I am running the Gnome display server and I did another restart and I can now 
run Coot.
The magic of rebooting...
cheers, tom
________________________________
From: Paul Emsley <[email protected]>
Sent: Friday, July 7, 2023 2:09 AM
To: Tom Peat <[email protected]>; [email protected] <[email protected]>
Subject: Re: [ccp4bb] Coot query



On 06/07/2023 08:51, Tom Peat wrote:
Hello All,

I just had a very strange experience- I rebooted my linux machine (Ubuntu jammy 
7.81.0) and tried to start up Coot and received the following error message:


It is my understanding that jammy jellyfish, by default, uses Wayland as the 
display server. It seems to me then that running an X11-based application will 
have to go via XWayland, and who knows what goodies that could bring. So my 
suggestion to you is to try rebooting and using an X11-based display manager.


I will note here that a person such as yourself Tom could compile the gtk4 
branch of Coot, which can now run on Wayland directly.


Paul.


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