Dear Tommi,
you could write a program (perhaps with ChatGPT) that (i) stores water
molecules, (ii) stores protein atoms, and (iii) searches, among the water
molecules, for those that are close to two protein atoms that belong to
different chains.
Oliviero

Il giorno mer 6 nov 2024 alle ore 16:43 Kajander, Tommi A <
[email protected]> ha scritto:

> Dear all,
>
>
>
> Is there a something available to automatically analyse/identifiy/quantify
> bound (“bridging”) water molecules at protein-protein interfaces?  Could
> not find anyting right away.
>
>
>
> Thanks in advance,
>
> Best,
>
>
>
> Tommi
>
>
>
>
>
>
>
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