On Tuesday 06 March 2007 12:09:30 Yann Mauon wrote:
> Thanks for your answer. In fact, I'm talking about xml (or asn) file
> provided by nist at the following format :
>
>  <PC-Compound>
>     <PC-Compound_id>
>       <PC-CompoundType>
>         <PC-CompoundType_id>
>           <PC-CompoundType_id_cid>2244</PC-CompoundType_id_cid>
>         </PC-CompoundType_id>
>       </PC-CompoundType>
>     </PC-Compound_id>
>     <PC-Compound_atoms>
>       <PC-Atoms>
>         <PC-Atoms_aid>
>           <PC-Atoms_aid_E>1</PC-Atoms_aid_E>
>           <PC-Atoms_aid_E>2</PC-Atoms_aid_E>

BTW, this rather looks like the format used by PubChem. CDK does have a basic 
reader for files in the PubChem ASN syntax. Maybe that's a viable alternative 
for you.

Egon


-- 
CUBIC
blog: http://chem-bla-ics.blogspot.com/

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