I see that MFAnalyser is gone from trunk, to be replaced by
MolecularFormulaManipulator. Using MolecularFormulaManipulator and the
jar at http://cheminfo.informatics.indiana.edu/~rguha/code/java/nightly/,
I have the following results...

For the molecule represented by the SMILES string "C", I get a
molecular formula of "C1" (getString) and a molecular weight of -1
(getTotalExactMass).

Noel

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