Great, thanks for both of you Could be just as a feedback, seems "ant dist-large" for 1.3.8 works like "dist-all" meaning makes many jar instead of only a big one !
Best, Alireza On Wed, Feb 23, 2011 at 8:20 AM, Egon Willighagen < egon.willigha...@gmail.com> wrote: > Hi Alireza, > > On Wed, Feb 23, 2011 at 12:34 AM, Alireza Kashani > <alireza.kashanip...@gmail.com> wrote: > > I exported all jar files from, cdk/dis/jar into my java classpath > > For your use case I recommend to build a single jar from source with: > > ant clean dist-large > > Which will create a dist/jar/cdk-1.3.8.jar in the source folder. > > Then, you can do on Linux (what operating system are you using?): > > $ cp /path/to/cdk/dist/jar/cdk-1.3.8.jar . > $ CLASSPATH=cdk-1.3.8.jar jython > > which allows me to do on the Jython command line: > > >>> import org.openscience.cdk.Atom > > Important all classes with your command > > >>> import org.openscience.cdk.*; > > does not work for me. Please try to import just the Atom class, which > will tell you if you placed the CDK jars in the right spot. > > Egon > > -- > Dr E.L. Willighagen > Postdoctoral Researcher > Institutet för miljömedicin > Karolinska Institutet > Homepage: http://egonw.github.com/ > LinkedIn: http://se.linkedin.com/in/egonw > Blog: http://chem-bla-ics.blogspot.com/ > PubList: http://www.citeulike.org/user/egonw/tag/papers >
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