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Hi all, I am a complete newbie to CellML and have occasionally used SBML for biochemical models. Can somebody please point me to documents (if they exist) on the possibility of using CellML to represent multi-scale models? Is there any example around? I want to try and use this, if it does work on a model we had worked on earlier which has cells with interactions modelled with some individual rules. The cells themselves are governed by biochemical networks that provide "state-inputs" to the cell for determining its behaviour (J Theor Biol. 2005 Apr 21;233(4):469-81.). Cheers, Chaitanya Athale. [EMAIL PROTECTED] wrote: Send cellml-discussion mailing list submissions to [email protected]To subscribe or unsubscribe via the World Wide Web, visit http://www.cellml.org/mailman/listinfo/cellml-discussion or, via email, send a message with subject or body 'help' to [EMAIL PROTECTED] You can reach the person managing the list at [EMAIL PROTECTED] When replying, please edit your Subject line so it is more specific than "Re: Contents of cellml-discussion digest..." Today's Topics: 1. cellml in synthetic biology (James Lawson) ---------------------------------------------------------------------- Message: 1 Date: Mon, 29 Oct 2007 17:18:31 +1300 From: James Lawson <[EMAIL PROTECTED]> Subject: [cellml-discussion] cellml in synthetic biology To: CellML Discussion List <[email protected]> Message-ID: <[EMAIL PROTECTED]> Content-Type: text/plain; charset=ISO-8859-1; format=flowed Here's a really interesting project (IMO) that seems to be pretty keen on using Cellml. http://openwetware.org/wiki/Talk:Registry_of_Standard_Biological_Models http://openwetware.org/wiki/Registry_of_Standard_Biological_Models/Registry_organization Openwetware is a big MIT based initiative to create a forum for and standardise synthetic biology. Seems to me they need some info on CellML... and some support. The first link talks about SBML (Mike Hucka is quoted,) but also mentions that multiscale modelling will be essential, which isn't something that SBML could call its forte. We, however, can. So don't mind if I do... ;) James ------------------------------ _______________________________________________ cellml-discussion mailing list [email protected] http://www.cellml.org/mailman/listinfo/cellml-discussion End of cellml-discussion Digest, Vol 39, Issue 12 ************************************************* -- Chaitanya Athale, Postdoc, Karsenti Lab, Cell Biology and Biophysics, EMBL Heidelberg. http://www.embl.de/~athale |
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