From Steven Niederer (through Gareth):
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Hi everyone,
this from Steven in Oxford, via the CellML Webmaster account. Please let
me know if there is a more appropriate contact I can forward this mail to.
thanks, Gareth
Steven Niederer wrote:
Hi guys,
Just checking if there was any work been done on the following:
1) creating maps of variable names to allow a user (me) to define a
variable that I want to change in a one file and have that mapped onto
the corresponding variable in a model. (I am batch processing analysis
of 20+ models at the moment)
ie I wish to set value for intracellular calcium. I want to call the
variable Cai but in the models that I have it is called cai, Cai and
Ca_i etc. so I wish to create a wrapper for each model to map the
variables to a standard name.
Is there any work been done on things like this and if so is their a
recommended format for the mapping wrapper?
2) Defining virtual experiment protocols.
After defining the model variables that I wish to set as model outputs
or inputs I would like to define how the input variables are set and
if I want any post processing to be done on my output signals.
Again I wondered if there was a proposed format for these types of
descriptions.
Any suggestions would be great.
cheers
Steven Niederer
begin:vcard
fn:Gareth de Walters
n:de Walters;Gareth
org:University of Auckland;Auckland Bioengineering Institute
adr:Auckland;;Level 6, 70 Symonds St;;;;New Zealand
title:Webmaster and Database Administrator
tel;work:+64 9 373 7599 extension 85360
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url:www.bioeng.auckland.ac.nz
version:2.1
end:vcard
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