Isn't the "science" of intelligent design an oxymoron?

On Tue, Jun 8, 2010 at 11:47 AM, G Money <[email protected]> wrote:
>
> This is wonderful.
>
> I would love to see an equally well crafted summary of the "science" of
> intelligent design...if anyone has that in them.
>
> Great stuff Judah.
>
> On Mon, Jun 7, 2010 at 4:29 PM, Judah McAuley <[email protected]> wrote:
>
>>
>> Evolution is a very commonly misunderstood term and the
>> socio-political use of the word doesn't really match up with the
>> scientific use, leaving things rather muddy. Even within the
>> scientific realm there is a lot you have to specify in order to really
>> get to what you mean by the word, it's a big discipline. It is kind of
>> like saying "I don't believe in Physics" when really you may just be
>> disputing the validity of String Theory or the Copenhagen
>> Interpretation.
>>
>> Getting back to macro evolution and micro evolution, those are terms
>> commonly used outside of the discipline to distinguish between
>> phenotypic (stuff you can see, like beak shape or fur color) change
>> within a species over time versus the act of speciation, that is, the
>> formation of a new species. The first kind is often called micro
>> evolution and is really kind of a red herring because, broadly
>> speaking, everyone has agreed on that for hundreds of years. People
>> saw the change in heritable characteristics (those that can be passed
>> on to children) long before the time of Darwin and Lyle. Gregor Mendel
>> laid out the concept of what we now call Mendelian Genetics (obviously
>> he didn't know anything about DNA), showing how heritable traits were
>> passed on in pea plants at the same time that Darwin was publishing
>> his work. Mendel was a priest and there was no theological trouble
>> with his work because it was just documenting how a species passes on
>> variation. Those who try to dispute Creationism by showing incremental
>> evolution within a species are doing them a disservice because that
>> really isn't the heart of the dispute at all.
>>
>> Then we get to what Kris is calling Macro Evolution, which is a term
>> used to refer to the production of a new species from an existing
>> species. This is where the dispute over "evolution" really comes into
>> play, it isn't a disagreement about whether things evolve, it is a
>> disagreement about speciation. Darwin called his work "On the Origin
>> of Species" or, in the long form, "On the Origin of Species by Means
>> of Natural Selection, or the Preservation of Favoured Races in the
>> Struggle for Life". The title of his work is the key here, he wanted
>> to show a mechanism for the creation of new species from existing
>> species.
>>
>> Darwin had a couple of key insights and, put together, they are
>> generally known as "descent with modifications and preferential
>> survival". It works thusly:
>>
>> 1. In every generation, there are multiple values in a population for
>> a heritable trait
>> 2. Those values are not passed on with complete fidelity. Some
>> offspring will get one value for a trait, some another value, some a
>> value not obviously present in the parents.
>> 3. Those values can have differential survival outcomes, ie, members
>> with one value may be more likely to survive and pass on that value
>> than members with another value.
>>
>> This, in a nutshell, forms the basis of Evolution, why species change.
>> Darwin then went on to show that that algorithm (though he would not
>> have called it that) can produce speciation.  As a side note, people
>> differ in their distinction on what constitutes a species. Some people
>> take a very cut and dried line that says two populations are different
>> species if they cannot breed and produce viable offspring. While that
>> is the easiest way to define it, it isn't very useful in a practical
>> context because then you have to explain why lions and tigers aren't
>> different species. More generally, a species is usually defined as a
>> population that is genetically and physiologically distinct and that
>> does not naturally interbreed with another population. So while lions
>> and tigers can mate and produce offspring, they do not do so in the
>> wild and they form distinct populations and have important genetic and
>> physiological differences. The bit about interbreeding, of course,
>> goes out the window when you are talking about asexually reproducing
>> (and especially self propagating) organisms.
>>
>> There are a couple different methods of speciation normally
>> recognized. The most common kinds are called Allopatric and Peripatric
>> speciation. These both are a result of separation of populations of a
>> given species, usually geographically. For instance, a segmenting of
>> the range of a species due to deforestation where the populations in
>> the two new regions no longer encounter one another much because their
>> range isn't contiguous any longer. These two populations start out
>> with differences in their genetic make up that would normally be a
>> wash when the whole population is interbreeding. However, due to the
>> lack of ongoing contact between the populations, the differences
>> between the pool of variation combined with the continuing process of
>> descent with modification and natural selection can produce enough
>> variation over many generations to make the two populations distinct
>> enough that they not only do not but can not interbreed successfully.
>> This is known as allopatric speciation.
>>
>> Peripatric speciation is a more extreme version of allopatric
>> speciation, usually involving substantial geographic separation like
>> the formation or colonization of islands. It is also the subject of
>> the discipline known as Island Biogeography. Basically, there are
>> times when otherwise unreachable spots are reached by a group of
>> individuals, like when land bridges appear during periods of extremely
>> low sea levels. These new populations may then be cut off again and
>> this new, isolated, population will be characterized by having a very
>> small pool of genetic diversity to start with. This is known as the
>> Founder Effect. In these cases, traits which might be very rare in the
>> parent population become much more common in the child population
>> because of the small number of individuals contributing to the overall
>> starting pool.  The founder effect, combined with the fact that
>> natural selection often rewards different characteristics in a small,
>> island setting than it does on a large contiguous region, often means
>> that these isolated populations will diverge quickly and dramatically
>> from the parent population. Peripatric speciation is the reason why
>> Australia largely has marsupial mammals whereas marsupial mammals are
>> quite rare everywhere else. They got cut off early in the changes in
>> mammalian physiology and due to low gene flow in from the outside, the
>> trend continued there but diverged elsewhere.
>>
>> There are other types of speciation discussed, such as sympatric
>> speciation. Sympatric speciation is a hotly disputed area, however, as
>> it hypothesizes how two species can arise in the same area without
>> substantial separation. As far as I'm aware, there aren't any
>> instances of this type of speciation that have been shown to happen in
>> the wild, but I haven't really studied the subject in awhile, so I'm
>> not sure what the current state of research on sympatric speciation
>> is.
>>
>> Speciation has been observed in the laboratory in a number of
>> experiments. The most common (among animals) are with Drosophila,
>> fruit flies, because of their short generation time, wide use in the
>> lab and high rate of natural genetic variability. A summary of some of
>> the instances of observed speciation can be found here:
>> http://www.talkorigins.org/faqs/faq-speciation.html  It also contains
>> a further discussion of what constitutes a species and a discussion of
>> the Biological Species Model.
>>
>> A lot to digest, I know, but hopefully it will help people thinking
>> about the arguments around Evolution and, more specially, that we are
>> really talking about an argument regarding speciation.
>>
>> Cheers,
>> Judah
>>
>>
>>
>> On Mon, Jun 7, 2010 at 11:08 AM, Kris Sisk <[email protected]> wrote:
>> >
>> >>Is the dogs/wolves example even an example of evolution? Isn't it
>> >>domestication?
>> >>
>> >
>> > Domestication is usually a perfect example of that type of evolution. I
>> think that micro evolution is the one that would be wolves to dogs, but I
>> never could keep the two terms straight for some reason. Another example
>> would be the finches observed by Darwin just prior to writing the Origin of
>> the Species. They had obviously evolved differing beaks for differing
>> purposes, but they were all still finches. If those finches had evolved into
>> hummingbirds, for example, that would be macro evolution (assuming I haven't
>> gotten the two terms mixed up).
>> >
>> > Now before anyone jumps down my throat, I'm just illustrating the point.
>> >
>>
>>
>
> 

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