Hi Alison,

Following the example of the European intercomparison (CARBOCEAN?), the
intent was to have two sets of variables for inorganic C, N, P, Fe, Alk
and Si for a tracer equation integrated over the upper 100m such as:

dtracer/dt = Jtracer + tracer_physics

where:

1) Jtracer = the net biological source sink terms integrated in the
upper 100m in units of mol m2 s-1
2) dtracer = the time rate of change of the tracer(s) integrated in the
upper 100m in units of mol m2 s-1

with the calculation of dtracer allows the back-calculation of the
accumulated role of physical processes on the tracers.

Make sense? - John

----- Original Message -----
From: [email protected]
Date: Tuesday, April 27, 2010 8:10 am
Subject: RE: [CF-metadata] CMIP5 ocean biogeochemistry standard names

> Dear John,
> 
> I was looking again at the biogeochemistry names in preparation for
> adding them to the CMIP5 output document as accepted standard 
> names.  I
> am concerned that we may have given the wrong names to some of the
> vertically integrated rates of change in the top 100m of the ocean.
> Please can you advise on the definitions.  Currently the names are
> listed as:
> 
> tendency_of_ocean_mole_content_of_dissolved_inorganic_carbon
> tendency_of_ocean_mole_content_of_dissolved_inorganic_nitrogen
> tendency_of_ocean_mole_content_of_dissolved_inorganic_phosphorus
> tendency_of_ocean_mole_content_of_dissolved_inorganic_iron
> tendency_of_ocean_mole_content_of_dissolved_inorganic_silicon
> integral_wrt_depth_of_tendency_of_sea_water_alkalinity_expressed_as_mole
> _equivalent
> tendency_of_ocean_mole_content_of_dissolved_inorganic_carbon_due_to_biol
> ogical_processes
> tendency_of_ocean_mole_content_of_dissolved_inorganic_nitrogen_due_to_bi
> ological_processes
> tendency_of_ocean_mole_content_of_dissolved_inorganic_phosphorus_due_to_
> biological_processes
> tendency_of_ocean_mole_content_of_dissolved_inorganic_iron_due_to_biolog
> ical_processes
> tendency_of_ocean_mole_content_of_dissolved_inorganic_silicon_due_to_bio
> logical_processes
> integral_wrt_depth_of_tendency_of_sea_water_alkalinity_expressed_as_mole
> _equivalent_due_to_biological_processes
> 
> The first two names are defined as follows:
> tendency_of_ocean_mole_content_of_dissolved_inorganic_nitrogen
> 'Net time rate of change of dissolved inorganic carbon in upper 100m'
> and
> tendency_of_ocean_mole_content_of_dissolved_inorganic_phosphorus
> 'Net time rate of change of nitrogen nutrients (e.g. NO3+NH4) in upper
> 100m'.
> If these quantities should be interpreted as the time rate of 
> change of
> the vertically integrated mole_concentration, then these names are
> correct.
> 
> However, the remainder of the names have definitions along the 
> lines of:
> tendency_of_ocean_mole_content_of_dissolved_inorganic_phosphorus
> 'Vertical integral of net time rate of change of phosphate in upper
> 100m',
> which is clearly the vertical integral of the rate of change and 
> not the
> rate of change of the vertical integral.  I don't think those two 
> thingsare identical, are they?
> 
> If the order of the calculation is important then I think we should
> adopt the pattern used in the alkalinity names for all these names,
> i.e.,
> integral_wrt_depth_of_tendency_of_mole_concentration_of_dissolved_inorga
> nic_phosphorus_in_sea_water, etc.  Do you agree?
> 
> Best wishes,
> Alison
> 
> ------
> Alison Pamment                          Tel: +44 1235 778065
> NCAS/British Atmospheric Data Centre    Fax: +44 1235 446314
> Rutherford Appleton Laboratory          Email: 
> [email protected], Didcot, OX11 0QX, U.K.
> 
> 
> -- 
> Scanned by iCritical.
> 
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