Dear Alison

Thanks - that's right.

Best wishes

Jonathan

----- Forwarded message from Alison Pamment - UKRI STFC 
<alison.pamm...@stfc.ac.uk> -----

> Date: Wed, 29 May 2019 14:44:17 +0000
> From: Alison Pamment - UKRI STFC <alison.pamm...@stfc.ac.uk>
> To: "cf-metadata@cgd.ucar.edu" <cf-metadata@cgd.ucar.edu>
> Subject: Re: [CF-metadata] too many eddies in standard names
> 
> Dear Jonathan, Martin and Karl,
> 
> Martin's email about stresses at the liquid ocean surface reminded me that in 
> March we had also agreed to change the OMIP eddy_dianeutral_mixing names to 
> remove the word 'eddy' and amend the definitions accordingly:
> 
> tendency_of_sea_water_conservative_temperature_expressed_as_heat_content_due_to_parameterized_eddy_dianeutral_mixing
>  -> 
> tendency_of_sea_water_conservative_temperature_expressed_as_heat_content_due_to_parameterized_dianeutral_mixing
> 
> tendency_of_sea_water_potential_temperature_expressed_as_heat_content_due_to_parameterized_eddy_dianeutral_mixing
>  -> 
> tendency_of_sea_water_potential_temperature_expressed_as_heat_content_due_to_parameterized_dianeutral_mixing
> 
> tendency_of_sea_water_salinity_expressed_as_salt_content_due_to_parameterized_eddy_dianeutral_mixing
>  -> 
> tendency_of_sea_water_salinity_expressed_as_salt_content_due_to_parameterized_dianeutral_mixing.
> 
> The reference to eddies will be removed from the definitions and replaced 
> with the text suggested by Martin:
> ' "Dianeutral mixing" refers to mixing across surfaces of neutral bouyancy. 
> "Parameterized"  means the part due to a scheme representing processes which 
> are not explicitly resolved by the model.'
> 
> These changes are accepted for publication in the standard name table and 
> will be added in the June update.
> 
> Best wishes,
> Alison
> 
> -----------------------------------------------------------------------------------------------------------
> Alison Pamment                                                         Tel: 
> +44 1235 778065
> NCAS/Centre for Environmental Data Analysis    Email: 
> alison.pamm...@stfc.ac.uk
> STFC Rutherford Appleton Laboratory     
> R25, 2.22
> Harwell Oxford, Didcot, OX11 0QX, U.K.
> 
> 
> -----Original Message-----
> From: CF-metadata <cf-metadata-boun...@cgd.ucar.edu> On Behalf Of Taylor, 
> Karl E.
> Sent: 06 March 2019 19:59
> To: cf-metadata@cgd.ucar.edu
> Subject: Re: [CF-metadata] too many eddies in standard names
> 
> Sounds fine to me.
> Karl
> 
> On 3/6/19 6:19 AM, Jonathan Gregory wrote:
> > Dear Alison
> >
> > Yes, that's right, just the three dianeutral mixing terms. The names 
> > should have _eddy removed, and Martin's deletion of "eddy" from the 
> > definitions looks good to me. Sorry I didn't notice this before. Many 
> > thanks.
> >
> > Best wishes
> >
> > Jonathan
> >
> > ----- Forwarded message from Alison Pamment - UKRI STFC 
> > <alison.pamm...@stfc.ac.uk> -----
> >
> >> Dear Jonathan, Martin, Karl,
> >>
> >> Thanks for discussing these names - I am always keen to make standard 
> >> names and their definitions as accurate as possible, including making 
> >> corrections if we don't get everything right in the original discussion. 
> >> If I understand correctly, it is now only the dianeutral mixing terms that 
> >> are  being revisited and the other eddy terms introduced for OMIP should 
> >> stay as originally agreed - is that right?
> >>
> >> I am not an expert in these quantities, but I am happy to update the 
> >> dianeutral mixing definitions as suggested by Martin if others are in 
> >> agreement.
> >>
> >> Best wishes,
> >> Alison
> >>
> >> -----------------------------------------------------------------------------------------------------------
> >> Alison Pamment                                                         
> >> Tel: +44 1235 778065
> >> NCAS/Centre for Environmental Data Analysis    Email: 
> >> alison.pamm...@stfc.ac.uk
> >> STFC Rutherford Appleton Laboratory
> >> R25, 2.22
> >> Harwell Oxford, Didcot, OX11 0QX, U.K.
> >>
> >>
> >> -----Original Message-----
> >> From: CF-metadata <cf-metadata-boun...@cgd.ucar.edu> On Behalf Of 
> >> Martin Juckes - UKRI STFC
> >> Sent: 04 March 2019 19:36
> >> To: Jonathan Gregory <j.m.greg...@reading.ac.uk>; 
> >> cf-metadata@cgd.ucar.edu
> >> Cc: stephen.griff...@noaa.gov
> >> Subject: Re: [CF-metadata] too many eddies in standard names
> >>
> >> Hello Jonathan,
> >>
> >>
> >> I agree that using "eddy" in terms which relate to vertical mixing is not 
> >> ideal. It is not entirely incorrect, but I I think most people associate 
> >> the term "eddy" with horizontal motions and so it is likely to cause 
> >> confusion.
> >>
> >>
> >> The current definition:
> >>
> >> '"Eddy dianeutral mixing" means dianeutral mixing, i.e. mixing across 
> >> neutral directions caused by the unresolved turbulent motion of eddies of 
> >> all types (e.g., breaking gravity waves, boundary layer turbulence, etc.).'
> >>
> >> would then need to be replaced with something like:
> >>
> >> '"Dianeutral mixing" refers to mixing across surfaces of neutral bouyancy. 
> >> "Parameterized"  means the part due to a scheme representing processes 
> >> which are not explicitly resolved by the model.'
> >>
> >> regards,
> >> Martin
> >>
> >>
> >>
> >> ________________________________
> >> From: CF-metadata <cf-metadata-boun...@cgd.ucar.edu> on behalf of 
> >> Jonathan Gregory <j.m.greg...@reading.ac.uk>
> >> Sent: 04 March 2019 17:52
> >> To: cf-metadata@cgd.ucar.edu
> >> Cc: stephen.griff...@noaa.gov
> >> Subject: Re: [CF-metadata] too many eddies in standard names
> >>
> >> Dear Martin, Alison, Steve et al.
> >>
> >> You're quite right. I had completely forgotten this discussion. That 
> >> reduces my concern a lot! Thanks. On 19 May 2017 
> >> (http://mailman.cgd.ucar.edu/pipermail/cf-metadata/2017/019440.html, 
> >> subject "New standard names for OMIP: physics" for this and related 
> >> emails) I agreed with Alison and Steve Griffies that parameterized 
> >> mesoscale advection (often Gent-McWilliams in ocean models) and 
> >> parameterized submesoscale advection should have "eddy" included 
> >> because they are contributions to parameterized eddy advection, and 
> >> that parameterized mesoscale diffusion (often called "isopycnal 
> >> diffusion" in ocean models) could also have eddy included by analogy. 
> >> However this email didn't talk about inserting "eddy" in the 
> >> dianeutral mixing names. Alison suggested this on 12 Oct 2017
> >> (http://mailman.cgd.ucar.edu/pipermail/cf-metadata/2017/019683.html)
> >> and I didn't notice - sorry about that. There are three such names:
> >>
> >> tendency_of_sea_water_conservative_temperature_expressed_as_heat_cont
> >> ent_due_to_parameterized_eddy_dianeutral_mixing
> >> tendency_of_sea_water_potential_temperature_expressed_as_heat_content
> >> _due_to_parameterized_eddy_dianeutral_mixing
> >> tendency_of_sea_water_salinity_expressed_as_salt_content_due_to_param
> >> eterized_eddy_dianeutral_mixing
> >>
> >> which as proposed did not contain "eddy". These quantities do not refer to 
> >> eddies in the sense of the other ones, and I suggest we should remove the 
> >> eddy in the standard names. I wonder what you all think.
> >>
> >> Best wishes
> >>
> >> Jonathan
> >>
> >>
> >> ----- Forwarded message from Martin Juckes - UKRI STFC 
> >> <martin.juc...@stfc.ac.uk> -----
> >>
> >>> Date: Sun, 3 Mar 2019 21:40:02 +0000
> >>> From: Martin Juckes - UKRI STFC <martin.juc...@stfc.ac.uk>
> >>> To: Jonathan Gregory <j.m.greg...@reading.ac.uk>, 
> >>> "cf-metadata@cgd.ucar.edu"
> >>>         <cf-metadata@cgd.ucar.edu>
> >>> Subject: Re: [CF-metadata] too many eddies in standard names
> >>>
> >>> Dear Jonathan,
> >>>
> >>>
> >>> The CMIP6 Data Request uses the terms which are in the CF Standard Name 
> >>> list ... with "eddy_advection".
> >>>
> >>>
> >>> The CF Standard Name editor link for one of the terms is here:
> >>> <https://docs.google.com/presentation/d/1Enafy971fSF3mNJb5MObm3buH2y
> >>> Am
> >>> amMkRcj5h9WmJM/edit#slide=id.p>
> >>> http://cfeditor.ceda.ac.uk/proposal/1795.<http://cfeditor.ceda.ac.uk
> >>> /p
> >>> roposal/1795>
> >>>
> >>>
> >>> The email thread is here (the link from the editor is broken):
> >>> http://mailman.cgd.ucar.edu/pipermail/cf-metadata/2017/019691.html
> >>> .<http://mailman.cgd.ucar.edu/pipermail/cf-metadata/2017/019691.html
> >>> >
> >>>
> >>>
> >>> I'm not sure if I've followed all the details ... but it looks as though 
> >>> Alison proposed adding "eddy" and her proposal was accepted.
> >>>
> >>>
> >>> regards,
> >>>
> >>> Martin
> >>>
> >>>
> >>> ________________________________
> >>> From: CF-metadata <cf-metadata-boun...@cgd.ucar.edu> on behalf of 
> >>> Jonathan Gregory <j.m.greg...@reading.ac.uk>
> >>> Sent: 01 March 2019 17:45
> >>> To: cf-metadata@cgd.ucar.edu
> >>> Subject: Re: [CF-metadata] too many eddies in standard names
> >>>
> >>> Dear Martin
> >>>
> >>> The names did get approved on the email list in the usual way.
> >>> However, some- thing must have gone wrong somewhere. Either the 
> >>> names we asked to be approved were wrong (not the same as the ones 
> >>> in the papers, which is what we intended), or the names in the 
> >>> standard_name table aren't the ones that were approved - which seems 
> >>> unlikely. I'm quite prepared to find that it was my mistake some- 
> >>> where! Anyway, I think it could be put right with aliases. What do we 
> >>> have in the CMIP6 data request?
> >>>
> >>> Best wishes
> >>>
> >>> Jonathan
> >>>
> >>> ----- Forwarded message from Martin Juckes - UKRI STFC 
> >>> <martin.juc...@stfc.ac.uk> -----
> >>>
> >>>> Date: Fri, 1 Mar 2019 08:39:54 +0000
> >>>> From: Martin Juckes - UKRI STFC <martin.juc...@stfc.ac.uk>
> >>>> To: "Taylor, Karl E." <taylo...@llnl.gov>, "cf-metadata@cgd.ucar.edu"
> >>>>         <cf-metadata@cgd.ucar.edu>
> >>>> Subject: Re: [CF-metadata] too many eddies in standard names
> >>>>
> >>>> Hello Jonathan, Karl,
> >>>>
> >>>>
> >>>> I don't understand why this is considered an "error" in the standard 
> >>>> names. There are many cases where people have put terms in their GMD 
> >>>> papers and claimed that they are "CF standard names" without taking the 
> >>>> trouble to put them through the discussion and approval process of the 
> >>>> CF Convention. This is a clear procedural error which happened in 
> >>>> several MIPs ... we obviously need to improve communication on the 
> >>>> procedures.
> >>>>
> >>>>
> >>>> In answer to Karl's question: there are no approved or aliased terms of 
> >>>> the form "....mesoscale_advection" in the CF Standard Name list. The 
> >>>> approved terms  consistently use the form 
> >>>> "mesoscale/submesoscale_eddy_advection".
> >>>>
> >>>>
> >>>> I didn't follow the discussion on these terms when they were added 
> >>>> .. Alison may be able to say more about why the "eddy" term is 
> >>>> included,
> >>>>
> >>>>
> >>>> regards,
> >>>>
> >>>> Martin
> >>>>
> >>>>
> >>>>
> >>>>
> >>>> ________________________________
> >>>> From: CF-metadata <cf-metadata-boun...@cgd.ucar.edu> on behalf of 
> >>>> Taylor, Karl E. <taylo...@llnl.gov>
> >>>> Sent: 27 February 2019 21:47
> >>>> To: cf-metadata@cgd.ucar.edu
> >>>> Subject: Re: [CF-metadata] too many eddies in standard names
> >>>>
> >>>> Hi Jonathan,
> >>>>
> >>>> One could conceivably want to distinguish between, for example,
> >>>>
> >>>> northward_ocean_heat_transport_due_to_parameterized_mesoscale_eddy_
> >>>> a
> >>>> dvection
> >>>>
> >>>> and
> >>>>
> >>>> northward_ocean_heat_transport_due_to_parameterized_mesoscale_advec
> >>>> t
> >>>> ion
> >>>>
> >>>> or does "mesoscale" imply "eddy" and for that reason "eddy" can be 
> >>>> removed?  If "mesocale eddy advection" and mesocale advection" are not 
> >>>> identical, we could leave the already defined variables as is and add a 
> >>>> companion set with "eddy" omitted.
> >>>>
> >>>> Of course for CMIP6, we would want to request only one of the two types 
> >>>> of advection; from your reference to GMD, I assume you want the quantity 
> >>>> without "eddy" in the name.
> >>>>
> >>>> best regards,
> >>>> Karl
> >>>>
> >>>>
> >>>>
> >>>> On 2/27/19 10:46 AM, Jonathan Gregory wrote:
> >>>>> Dear Alison, Martin et al.
> >>>>>
> >>>>> I have noticed that several of the new ocean tendency diagnostics 
> >>>>> we have added to the standard name table for CMIP6 contain "eddy", but 
> >>>>> should not do.
> >>>>> The word "eddy" should appear only in 
> >>>>> parameterized_eddy_advection, not in mesoscale advection, 
> >>>>> mesoscale diffusion, submesoscale advection or dianeutral mixing.
> >>>>> I think _eddy should be deleted from all of the names listed 
> >>>>> below. I don't know how we got this wrong! The standard names appear 
> >>>>> correctly in the two relevant GMD papers.
> >>>>>
> >>>>> Best wishes
> >>>>>
> >>>>> Jonathan
> >>>>>
> >>>>> northward_ocean_heat_transport_due_to_parameterized_mesoscale_eddy
> >>>>> _advection
> >>>>> northward_ocean_heat_transport_due_to_parameterized_mesoscale_eddy
> >>>>> _diffusion
> >>>>> northward_ocean_heat_transport_due_to_parameterized_submesoscale_e
> >>>>> ddy_advection
> >>>>> ocean_meridional_overturning_mass_streamfunction_due_to_parameteri
> >>>>> zed_mesoscale_eddy_advection
> >>>>> ocean_meridional_overturning_mass_streamfunction_due_to_parameteri
> >>>>> zed_submesoscale_eddy_advection
> >>>>> ocean_tracer_biharmonic_diffusivity_due_to_parameterized_mesoscale
> >>>>> _eddy_advection
> >>>>> ocean_tracer_diffusivity_due_to_parameterized_mesoscale_eddy_advec
> >>>>> tion
> >>>>> ocean_tracer_laplacian_diffusivity_due_to_parameterized_mesoscale_
> >>>>> eddy_advection
> >>>>> ocean_y_overturning_mass_streamfunction_due_to_parameterized_mesos
> >>>>> cale_eddy_advection
> >>>>> ocean_y_overturning_mass_streamfunction_due_to_parameterized_subme
> >>>>> soscale_eddy_advection
> >>>>> tendency_of_sea_water_conservative_temperature_expressed_as_heat_c
> >>>>> ontent_due_to_parameterized_eddy_dianeutral_mixing
> >>>>> tendency_of_sea_water_conservative_temperature_expressed_as_heat_c
> >>>>> ontent_due_to_parameterized_mesoscale_eddy_advection
> >>>>> tendency_of_sea_water_conservative_temperature_expressed_as_heat_c
> >>>>> ontent_due_to_parameterized_mesoscale_eddy_diffusion
> >>>>> tendency_of_sea_water_conservative_temperature_expressed_as_heat_c
> >>>>> ontent_due_to_parameterized_submesoscale_eddy_advection
> >>>>> tendency_of_sea_water_potential_temperature_expressed_as_heat_cont
> >>>>> ent_due_to_parameterized_eddy_dianeutral_mixing
> >>>>> tendency_of_sea_water_potential_temperature_expressed_as_heat_cont
> >>>>> ent_due_to_parameterized_mesoscale_eddy_advection
> >>>>> tendency_of_sea_water_potential_temperature_expressed_as_heat_cont
> >>>>> ent_due_to_parameterized_mesoscale_eddy_diffusion
> >>>>> tendency_of_sea_water_potential_temperature_expressed_as_heat_cont
> >>>>> ent_due_to_parameterized_submesoscale_eddy_advection
> >>>>> tendency_of_sea_water_salinity_expressed_as_salt_content_due_to_pa
> >>>>> rameterized_eddy_dianeutral_mixing
> >>>>> tendency_of_sea_water_salinity_expressed_as_salt_content_due_to_pa
> >>>>> rameterized_mesoscale_eddy_advection
> >>>>> tendency_of_sea_water_salinity_expressed_as_salt_content_due_to_pa
> >>>>> rameterized_mesoscale_eddy_diffusion
> >>>>> tendency_of_sea_water_salinity_expressed_as_salt_content_due_to_pa
> >>>>> rameterized_submesoscale_eddy_advection
> >>>>> _______________________________________________
> >>>>> CF-metadata mailing list
> >>>>> CF-metadata@cgd.ucar.edu
> >>>>> http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata
> >>>> _______________________________________________
> >>>> CF-metadata mailing list
> >>>> CF-metadata@cgd.ucar.edu
> >>>> http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata
> >>>> _______________________________________________
> >>>> CF-metadata mailing list
> >>>> CF-metadata@cgd.ucar.edu
> >>>> http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata
> >>> ----- End forwarded message -----
> >>> _______________________________________________
> >>> CF-metadata mailing list
> >>> CF-metadata@cgd.ucar.edu
> >>> http://mailman.cgd.ucar.edu/mailman/listinfo/cf-metadata
> >> ----- End forwarded message -----
> >> _______________________________________________
> >> CF-metadata mailing list
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> >> _______________________________________________
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> >>
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